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    • 2. 发明申请
    • CLONING OF SINGLE-STRANDED NUCLEIC ACID
    • 克隆单链核酸
    • WO2017013005A1
    • 2017-01-26
    • PCT/EP2016/066876
    • 2016-07-15
    • MAX-PLANCK-GESELLSCHAFT ZUR FÖRDERUNG DER WISSENSCHAFTEN E.V.
    • ILIK, Ibrahim AvsarAKHTAR, AsifaILIK, Tugce Aktas
    • C12N15/10C12Q1/68
    • C12N15/10C12Q1/68C12Q1/6804C12Q1/6853C12Q1/6869C12Q2525/121C12Q2525/197C12Q2525/204C12Q2525/301C12Q2527/107C12Q2522/10
    • The present invention relates to an oligonucleotide comprising (a) a double-stranded portion, which double-stranded portion is DNA and 9 to 30 base in length; (b) a loop connecting the 3' end of the first strand of said double-stranded portion with the 5' end of the second strand of said double-stranded portion, said loop comprising, in 5' to 3' direction: (ba) a first DNA portion which is 4 to 20 nucleotides in length; (bb) a non-nucleic acid spacer which (i) does not interfere with the formation of a stem-loop by said oligonucleotide; and (ii) causes polymerases to cease; and (be) a second DNA portion which is 4 to 20 nucleotides in length; wherein said first DNA portion and said second DNA portion are not complementary to each other; (c) a single-stranded overhang at its 5' end, said overhang being 5 to 40 nucleotides in length, wherein (ca) the bond connecting said double-stranded portion with the nucleotide of said overhang which is directly adjacent to said double-stranded portion is cleavable under alkaline conditions; and (cb) said overhang optionally comprises a barcode sequence, said barcode sequence preferably being 5 to 10 nucleotides in length; and optionally (d) within one, more or all of (a), (b) and (c), one, more or all of the following: (da) one or more modified nucleotides; (db) one or more sequences conferring compatibility with nucleic acid sequencing kits, such compatibility being preferably the presence of regions within said oligonucleotide which are complementary to primers comprised in said sequence kits; and (dc) one or more random bases.
    • 本发明涉及一种寡核苷酸,其包含(a)双链部分,其双链部分为DNA,长度为9〜30碱基; (b)将所述双股部分的第一股线的3'端与所述双股部分的第二股线的5'端连接的环,所述环包括在5'至3'方向上:(ba )长度为4至20个核苷酸的第一个DNA部分; (bb)非核酸间隔物,其(i)不干扰所述寡核苷酸形成茎环的干扰; 和(ii)导致聚合酶停止; 和(即)长度为4至20个核苷酸的第二个DNA部分; 其中所述第一DNA部分和所述第二DNA部分彼此不互补; (c)其5'端的单链突出端,所述突出端的长度为5至40个核苷酸,其中(ca)将所述双链部分与所述突出端的核苷酸连接的键,其直接与所述双链部分相邻, 绞合部分在碱性条件下可切割; 和(cb)所述突出端可选地包含条形码序列,所述条形码序列优选长度为5至10个核苷酸; (a),(b)和(c)中的一个,多个或全部中的一个,多个或全部:(da)一个或多个修饰的核苷酸; (db)赋予与核酸测序试剂盒的相容性的一个或多个序列,这种相容性优选是所述寡核苷酸内与所述序列试剂盒中包含的引物互补的区域的存在; 和(dc)一个或多个随机碱基。
    • 3. 发明申请
    • SIMULTANEOUS DETECTION OF OLIGONUCLEOTIDES, A KIT AND A USE RELATED THERETO
    • 同时检测寡核苷酸,与其相关的用途和用途
    • WO2016139262A1
    • 2016-09-09
    • PCT/EP2016/054450
    • 2016-03-02
    • AXOLABS GMBH
    • RÖHL, IngoDÖRFLER, NadineKNIS, Julia
    • C12Q1/68
    • C12Q1/6816C12Q2523/31C12Q2525/204C12Q2525/207C12Q2537/143C12Q2545/114C12Q2563/107C12Q2565/137C12Q2525/107
    • In a first aspect, the invention relates to a method for detecting at least two distinct oligonucleotides of equal length in parallel from one biological sample, said method comprising the steps of providing a biological sample containing or suspected of containing said oligonucleotides of interest; forming a hybridization mixture using at least two fluorescently labelled detection molecules with different surface charges; separating the detection molecules hybridised to said oligonucleotides by anion exchange HPLC; and detecting the hybridized detection molecule - oligonucleotide moieties by means of quantitative fluorescence readout. In a further aspect, the invention relates to a kit comprising at least two detection molecules as defined in the present invention. In another aspect, the invention relates to the use of at least two detection molecules with different surface charges for quantitatively detecting at least two distinct oligonucleotides of equal length in parallel from one biological sample.
    • 在第一方面,本发明涉及用于从一个生物样品平行检测至少两个相同长度的不同寡核苷酸的方法,所述方法包括提供含有或怀疑含有所述感兴趣的寡核苷酸的生物样品的步骤; 使用具有不同表面电荷的至少两个荧光标记的检测分子形成杂交混合物; 通过阴离子交换HPLC分离与所述寡核苷酸杂交的检测分子; 并通过定量荧光读数检测杂交检测分子 - 寡核苷酸部分。 在另一方面,本发明涉及包含本发明中定义的至少两个检测分子的试剂盒。 另一方面,本发明涉及使用具有不同表面电荷的至少两个检测分子来定量检测来自一个生物样品的至少两个相同长度的不同寡核苷酸。
    • 9. 发明申请
    • METHOD FOR THE SIMULTANEOUS AMPLIFICATION OF A PLURALITY OF DIFFERENT NUCLEIC ACID TARGET SEQUENCES
    • 同时扩增不同浓度的核酸目标序列的方法
    • WO2014068020A1
    • 2014-05-08
    • PCT/EP2013/072749
    • 2013-10-30
    • UNIVERSITÄTSSPITAL BASEL
    • KINTER, JochenSINNREICH, Michael
    • C12Q1/68
    • C12Q1/6883C12Q1/6858C12Q1/6888C12Q2600/16C12Q2525/204C12Q2537/143C12Q2549/119
    • The present invention relates to a method for the simultaneous amplification of a plurality of different nucleic acid target sequences comprising the steps of providing a plurality of different nucleic acid polymers as templates, each template comprising a specific target sequence and a primer annealing sequence located downstream of the target sequence, and amplifying the template by a polymerase dependent amplification reaction using a primer oligonucleotide comprising a primer sequence which is at least essentially complementary to the primer annealing sequence. The method is characterized in that for the polymerase dependent amplification reaction a set of primer oligonucleotides is used, said set comprising at least two primer oligonucleotides which are able to anneal to the primer annealing sequence of the same template and which differ from each other in the efficiency for the polymerase dependent amplification reaction to take place.
    • 本发明涉及同时扩增多个不同核酸靶序列的方法,包括以下步骤:提供多种不同的核酸聚合物作为模板,每个模板包含特定的靶序列和位于 靶序列,并使用包含与引物退火序列至少基本上互补的引物序列的引物寡核苷酸,通过聚合酶依赖性扩增反应扩增模板。 该方法的特征在于,对于聚合酶依赖性扩增反应,使用一组引物寡核苷酸,所述组包含至少两个引物寡核苷酸,其能够退火到相同模板的引物退火序列,并且在 聚合酶依赖性扩增反应发生的效率。