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    • 2. 发明申请
    • Method for modifying a property of a protein
    • 改变蛋白质性质的方法
    • US20050233308A1
    • 2005-10-20
    • US10933280
    • 2004-09-03
    • Yosuke NishioEiichiro KimuraYoshihiro UsudaKazuho IkeoYoji NakamuraTakashi GojoboriYutaka KawarabayashiYumi HinoEiichi HoriJun Yamazaki
    • Yosuke NishioEiichiro KimuraYoshihiro UsudaKazuho IkeoYoji NakamuraTakashi GojoboriYutaka KawarabayashiYumi HinoEiichi HoriJun Yamazaki
    • C12N15/09C12N1/21C12N9/00C12N15/10C12P21/02C12Q1/00G01N33/48G01N33/50G06F19/00
    • C12N9/88C12N9/00C12N9/0016C12N9/1205C12N15/1034C12N15/1089
    • A property of a protein is modified by the following steps: (a) selecting 1000 or more genes from the genome of a first microorganism, and selecting 1000 or more genes from the genome of a second microorganism, wherein the genes from the first microorganism are orthologs to the genes from the second microorganism, and wherein the second microorganism is closely related to the first microorganism, but grows differently under at least one optimum growth condition when compared with the first microorganism, (b) comparing an amino acid sequence encoded by a gene from the first microorganism to an amino acid sequence encoded by the orthologous gene from the second microorganism, (c) detecting substitutions between the amino acid sequence encoded by a gene from the first microorganism and the amino acid sequence encoded by a gene from the second microorganism for each pair of orthologous genes, (d) compiling the detected amino acid substitutions for each amino acid substitution type, (e) calculating the frequency of each amino acid substitution type, wherein for each detected amino acid substitution type, a correction is made by subtracting the total number of substitution types which occur from the first microorganism to the second microorganism from the total number of the same substitution type which occurs in the reverse direction, or from the second microorganism to the first microorganism, (f) identifying and labelling the amino acid substitutions which occur at a high frequency as amino acid substitutions which are involved in said optimum growth condition, and (g) introducing one or more of the amino acid substitutions identified in (f) into the gene encoding the protein to modify a property of the protein.
    • 通过以下步骤修饰蛋白质的性质:(a)从第一微生物的基因组中选择1000个或更多个基因,并从第二微生物的基因组中选择1000个或更多个基因,其中来自第一个微生物的基因是 与第二微生物的基因直系同源,其中第二微生物与第一微生物密切相关,但与第一微生物相比,在至少一个最佳生长条件下生长不同,(b)比较由第一微生物编码的氨基酸序列 基因从第一微生物到由第二微生物的直系同源基因编码的氨基酸序列,(c)检测由第一微生物的基因编码的氨基酸序列与由第二微生物的基因编码的氨基酸序列之间的取代 每对直系同源基因的微生物,(d)编码每个氨基酸取代类型的检测到的氨基酸取代,(e)cal 规定每个氨基酸取代型的频率,其中对于每个检测到的氨基酸取代类型,通过从相同的取代类型的总数中减去从第一微生物发生到第二微生物的替代类型的总数来进行校正 (f)鉴定和标记高频发生的氨基酸取代作为参与所述最佳生长条件的氨基酸取代,和(g) 将(f)中鉴定的一个或多个氨基酸取代引入编码蛋白质的基因中以改变蛋白质的性质。
    • 5. 发明申请
    • Amino-acid biosensor, fischer-ratio biosensor and health information management system
    • 氨基酸生物传感器,费 - 比生物传感器和健康信息管理系统
    • US20070031913A1
    • 2007-02-08
    • US11498982
    • 2006-08-04
    • Eiichiro Kimura
    • Eiichiro Kimura
    • C12Q1/37
    • C12Q1/32
    • Disclosed is a biosensor capable of measuring a total concentration of plural types of amino acids. An amino-acid biosensor (200) for measuring a total concentration of a plurality of specific amino acids, comprises a measuring electrode (202) which includes as components a mediator and an enzyme which selectively act on the plurality of specific amino acids each serving as a substrate, and a counter electrode (203). The enzyme has a substrate affinity to each of the plurality of specific amino acids. The enzyme is operable to catalyze a reaction in each of the plurality of specific amino acids as a substrate so as to form a reaction product, and the mediator is operable, during amino-acid concentration measurement, to carry electrons between the reaction product and the measuring electrode. The amino-acid biosensor is designed to apply a voltage between the measuring electrode and the counter electrode during the measurement in such a manner that, in an analytical curve representing a relationship between an applied voltage and a current value for each of the plurality of specific amino acids, the applied voltage includes a voltage allowing the variety of the current values for the amino acids at the same applied voltage to fall within a given range.
    • 公开了能够测定多种氨基酸的总浓度的生物传感器。 用于测量多种特定氨基酸的总浓度的氨基酸生物传感器(200)包括测量电极(202),其包含作为成分的介质和选择性地作用于多个特定氨基酸的酶,每个氨基酸用作 基板和对电极(203)。 该酶对多种特定氨基酸中的每一种具有底物亲和力。 该酶可操作地催化多种特定氨基酸中的每一种作为底物的反应以形成反应产物,并且在氨基酸浓度测量期间,介体可操作地在反应产物和 测量电极。 氨基酸生物传感器被设计成在测量期间在测量电极和对电极之间施加电压,使得在分析曲线中,表示施加的电压与多个特定的电极中的每一个的电流值之间的关系 氨基酸,所施加的电压包括允许在相同施加电压下的氨基酸的各种电流值落在给定范围内的电压。
    • 7. 发明授权
    • Amino-acid biosensor, fischer-ratio biosensor and health information management system
    • 氨基酸生物传感器,费 - 比生物传感器和健康信息管理系统
    • US08440068B2
    • 2013-05-14
    • US12585638
    • 2009-09-21
    • Eiichiro Kimura
    • Eiichiro Kimura
    • G01N27/26C12Q1/32
    • C12Q1/32
    • Disclosed is a biosensor capable of measuring a total concentration of plural types of amino acids. An amino-acid biosensor (200) for measuring a total concentration of a plurality of specific amino acids, comprises a measuring electrode (202) which includes as components a mediator and an enzyme which selectively act on the plurality of specific amino acids each serving as a substrate, and a counter electrode (203). The enzyme has a substrate affinity to each of the plurality of specific amino acids. The enzyme is operable to catalyze a reaction in each of the plurality of specific amino acids as a substrate so as to form a reaction product, and the mediator is operable, during amino-acid concentration measurement, to carry electrons between the reaction product and the measuring electrode. The amino-acid biosensor is designed to apply a voltage between the measuring electrode and the counter electrode during the measurement in such a manner that, in an analytical curve representing a relationship between an applied voltage and a current value for each of the plurality of specific amino acids, the applied voltage includes a voltage allowing the variety of the current values for the amino acids at the same applied voltage to fall within a given range.
    • 公开了能够测定多种氨基酸的总浓度的生物传感器。 用于测量多种特定氨基酸的总浓度的氨基酸生物传感器(200)包括测量电极(202),其包含作为成分的介质和选择性地作用于多个特定氨基酸的酶,每个氨基酸用作 基板和对电极(203)。 该酶对多种特定氨基酸中的每一种具有底物亲和力。 该酶可操作地催化多种特定氨基酸中的每一种作为底物的反应以形成反应产物,并且在氨基酸浓度测量期间,介体可操作地在反应产物和 测量电极。 氨基酸生物传感器被设计成在测量期间在测量电极和对电极之间施加电压,使得在分析曲线中,表示施加的电压与多个特定的电极中的每一个的电流值之间的关系 氨基酸,所施加的电压包括允许在相同施加电压下的氨基酸的各种电流值落在给定范围内的电压。
    • 10. 发明申请
    • Amino-acid biosensor, Fischer-ratio biosensor and health information management system
    • US20100017147A1
    • 2010-01-21
    • US12585638
    • 2009-09-21
    • Eiichiro Kimura
    • Eiichiro Kimura
    • G01N33/48
    • C12Q1/32
    • Disclosed is a biosensor capable of measuring a total concentration of plural types of amino acids. An amino-acid biosensor (200) for measuring a total concentration of a plurality of specific amino acids, comprises a measuring electrode (202) which includes as components a mediator and an enzyme which selectively act on the plurality of specific amino acids each serving as a substrate, and a counter electrode (203). The enzyme has a substrate affinity to each of the plurality of specific amino acids. The enzyme is operable to catalyze a reaction in each of the plurality of specific amino acids as a substrate so as to form a reaction product, and the mediator is operable, during amino-acid concentration measurement, to carry electrons between the reaction product and the measuring electrode. The amino-acid biosensor is designed to apply a voltage between the measuring electrode and the counter electrode during the measurement in such a manner that, in an analytical curve representing a relationship between an applied voltage and a current value for each of the plurality of specific amino acids, the applied voltage includes a voltage allowing the variety of the current values for the amino acids at the same applied voltage to fall within a given range.