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    • 1. 发明授权
    • Method for identifying cells based on DNA replication domain timing profiles
    • 基于DNA复制域定时分布识别细胞的方法
    • US08728979B2
    • 2014-05-20
    • US12200186
    • 2008-08-28
    • David M. GilbertTyrone RybaIchiro Hiratani
    • David M. GilbertTyrone RybaIchiro Hiratani
    • C40B30/04C12Q1/68
    • C12Q1/6837C12Q1/6804C12Q1/6806C12Q1/6809G01N33/5005C12Q2565/626C12Q2565/501C12Q2525/101
    • Methods for identifying and/or distinguishing a homogeneous population of cells based on their replication domain timing profile using high resolution genomic arrays or sequencing procedures are provided. These methods may be used to compare the replication timing profile for a population of cells to another replication timing profile(s), a replication timing fingerprint, and/or one or more informative segments of a replication timing fingerprint, which may be simultaneously or previously determined and/or contained in a database, to determine whether there is a match between them. Based on such information, the identity of the population of cells may be determined, or the identity of the population of cells may be distinguished from other populations of cells or cell types. Methods for determining a replication timing fingerprint for particular cell types are also provided.
    • 提供了基于使用高分辨率基因组阵列或测序程序的复制域时序概况来识别和/或区分同源细胞群的方法。 这些方法可用于将细胞群体的复制定时概况与复制定时指纹,复制定时指纹和/或复制定时指纹的一个或多个信息段进行比较,其可以同时或先前 确定和/或包含在数据库中,以确定它们之间是否存在匹配。 基于这样的信息,可以确定细胞群体的身份,或者细胞群体的身份可以与其他细胞群体或细胞类型区分开。 还提供了用于确定特定细胞类型的复制定时指纹的方法。
    • 2. 发明申请
    • GENOME-SCALE ANALYSIS OF REPLICATION TIMING
    • 复制时间的基因量化分析
    • US20120322675A1
    • 2012-12-20
    • US13479686
    • 2012-05-24
    • David M. GilbertTyrone RybaIchiro Hiratani
    • David M. GilbertTyrone RybaIchiro Hiratani
    • C40B30/04G06F19/20
    • C12Q1/6809C12Q1/6841C12Q1/6881C12Q2600/158C12Q2527/113C12Q2531/149C12Q2539/115C12Q2565/501
    • Methods for identifying and/or distinguishing a homogeneous population of cells based on their replication domain timing profile using high resolution genomic arrays or sequencing procedures are provided. These methods may be used to compare the replication timing profile for a population of cells to another replication timing profile(s), a replication timing fingerprint, and/or one or more informative segments of a replication timing fingerprint, which may be simultaneously or previously determined and/or contained in a database, to determine whether there is a match between them. Based on such information, the identity of the population of cells may be determined, or the identity of the population of cells may be distinguished from other populations of cells or cell types. Methods for determining a replication timing fingerprint for particular cell types are also provided.
    • 提供了基于使用高分辨率基因组阵列或测序程序的复制域时序概况来识别和/或区分同源细胞群的方法。 这些方法可用于将细胞群体的复制定时概况与复制定时指纹,复制定时指纹和/或复制定时指纹的一个或多个信息段进行比较,其可以同时或先前 确定和/或包含在数据库中,以确定它们之间是否存在匹配。 基于这样的信息,可以确定细胞群体的身份,或者细胞群体的身份可以与其他细胞群体或细胞类型区分开。 还提供了用于确定特定细胞类型的复制定时指纹的方法。
    • 3. 发明授权
    • Fingerprint for cell identity and pluripotency
    • 指纹用于细胞识别和多能性
    • US09245090B2
    • 2016-01-26
    • US13595017
    • 2012-08-27
    • David M. GilbertTyrone RybaJinfeng Zhang
    • David M. GilbertTyrone RybaJinfeng Zhang
    • G06F19/10G06F19/00G06F19/24
    • G06F19/24
    • A method for determining a replication timing footprint comprises the following steps: (a) selecting a set of chosen regions of the replication timing profile of a chromosome of an individual, (b) choosing a set of selected regions from the set of chosen regions to form a set of selected regions and a set of unused regions, (c) conducting a iterative algorithm on the set of selected regions until a domain number for the set of selected regions has decreased to a predetermined minimum, (d) determining a replication timing footprint based the set of selected regions after step (c) has been conducted, and (e) displaying the replication timing footprint to a user.
    • 一种用于确定复制定时覆盖区的方法包括以下步骤:(a)选择个体染色体的复制定时分布的一组选定区域,(b)从所选择的区域组中选择一组选定区域, 形成一组所选择的区域和一组未使用的区域,(c)对所选区域的集合进行迭代算法,直到所选择的区域集合的域号已经减小到预定的最小值,(d)确定复制定时 已经执行步骤(c)之后的所选区域集合的占位面积,以及(e)向用户显示复制定时覆盖区。