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    • 5. 发明申请
    • MICROORGANISMS FOR PRODUCING METHACRYLIC ACID AND METHACRYLATE ESTERS AND METHODS RELATED THERETO
    • 生产甲基丙烯酸和甲基丙烯酸酯的微生物及其相关方法
    • WO2012135789A3
    • 2014-05-01
    • PCT/US2012031733
    • 2012-03-30
    • GENOMATICA INCBURK MARK JBURGARD ANTHONY POSTERHOUT ROBIN ESUN JUNPHARKYA PRITI
    • BURK MARK JBURGARD ANTHONY POSTERHOUT ROBIN ESUN JUNPHARKYA PRITI
    • C12P7/52C12N1/00
    • C12P7/40C12P7/42C12P7/62C12P19/32
    • The invention provides a non-naturally occurring microbial organism having a methacrylic acid, methacrylate ester, 3-hydroxyisobutyrate and/or 2-hydroxyisobutyrate pathway. The microbial organism contains at least one exogenous nucleic acid encoding an enzyme in a methacrylic acid pathway. The invention additionally provides a method for producing methacrylic acid, methacrylate ester, 3-hydroxyisobutyrate and/or 2- hydroxyisobutyrate. The method can include culturing methacrylic acid, methacrylate ester, 3-hydroxyisobutyrate and/or 2-hydroxyisobutyrate producing microbial organism, where the microbial organism expresses at least one exogenous nucleic acid encoding a methacrylic acid pathway enzyme in a sufficient amount to produce methacrylic acid, methacrylate ester, 3-hydroxyisobutyrate and/or 2-hydroxyisobutyrate, under conditions and for a sufficient period of time to produce methacrylic acid, methacrylate ester, 3-hydroxyisobutyrate and/or 2-hydroxyisobutyrate.
    • 本发明提供具有甲基丙烯酸,甲基丙烯酸酯,3-羟基异丁酸酯和/或2-羟基异丁酸酯途径的非天然存在的微生物生物。 微生物生物体含有编码甲基丙烯酸途径中的酶的至少一种外源核酸。 本发明另外提供了生产甲基丙烯酸,甲基丙烯酸酯,3-羟基异丁酸酯和/或2-羟基异丁酸酯的方法。 该方法可以包括培养产生甲基丙烯酸,甲基丙烯酸酯,3-羟基异丁酸酯和/或2-羟基异丁酸酯的微生物,其中微生物生物体表达至少一种编码甲基丙烯酸途径酶的外源核酸,其量足以产生甲基丙烯酸, 甲基丙烯酸酯,3-羟基异丁酸酯和/或2-羟基异丁酸酯在条件下和足够的时间以产生甲基丙烯酸,甲基丙烯酸酯,3-羟基异丁酸酯和/或2-羟基异丁酸酯。
    • 8. 发明申请
    • ORGANISMS FOR THE PRODUCTION OF 1,3-BUTANEDIOL
    • 生产1,3-丁二醇的有机体
    • WO2010127319A3
    • 2010-12-23
    • PCT/US2010033300
    • 2010-04-30
    • GENOMATICA INCBURGARD ANTHONY PBURK MARK JOSTERHOUT ROBIN EPHARKYA PRITI
    • BURGARD ANTHONY PBURK MARK JOSTERHOUT ROBIN EPHARKYA PRITI
    • C12P7/16C12N1/20
    • C12P7/18C07C29/80C12N9/0006C12N9/0008C12N9/1029C12N9/1096C12N9/88C12N15/52C12Y101/01C12Y101/01157C12Y102/01C12Y203/01C12Y206/01C12Y401/01C12Y402/01C12Y403/01
    • A non-naturally occurring microbial organism includes a microbial organism having a 1,3-butanediol (1,3-BDO) pathway having at least one exogenous nucleic acid encoding a 1,3- BDO pathway enzyme expressed in a sufficient amount to produce 1,3-BDO. The pathway includes an enzyme selected from a 2-amino-4-ketopentanoate (AKP) thiolase, an AKP dehydrogenase, a 2-amino-4-hydroxypentanoate aminotransferase, a 2-amino-4- hydroxypentanoate oxidoreductase (deaminating), a 2-oxo-4-hydroxypentanoate decarboxylase, a 3-hydroxybutyraldehyde reductase, an AKP aminotransferase, an AKP oxidoreductase (deaminating), a 2,4-dioxopentanoate decarboxylase, a 3-oxobutyraldehyde reductase (ketone reducing), a 3-oxobutyraldehyde reductase (aldehyde reducing), a 4-hydroxy-2-butanone reductase, an AKP decarboxylase, a 4-aminobutan-2-one aminotransferase, a 4-aminobutan-2- one oxidoreductase (deaminating), a 4-aminobutan-2-one ammonia-lyase, a butenone hydratase, an AKP ammonia-lyase, an acetylacrylate decarboxylase, an acetoacetyl-CoA reductase (CoA- dependent, aldehyde forming), an acetoacetyl-CoA reductase (CoA-dependent, alcohol forming), an acetoacetyl-CoA reductase (ketone reducing), a 3-hydroxybutyryl-CoA reductase (aldehyde forming), a 3-hydroxybutyryl-CoA reductase (alcohol forming), a 4-hydroxybutyryl- CoA dehydratase, and a crotonase. A method for producing 1,3-BDO, includes culturing such microbial organisms under conditions and for a sufficient period of time to produce 1,3-BDO.
    • 非天然存在的微生物体包括具有1,3-丁二醇(1,3-BDO)途径的微生物生物,其具有至少一种编码1,3-BDO途径酶的外源核酸,所述外源核酸以足够的量表达,以产生1 ,3-BDO。 该途径包括选自2-氨基-4-酮戊酸(AKP)硫解酶,AKP脱氢酶,2-氨基-4-羟基戊酸转氨酶,2-氨基-4-羟基戊酸氧化还原酶(脱氨基),2- 4-羟基戊酸脱羧酶,3-羟基丁醛还原酶,AKP氨基转移酶,AKP氧化还原酶(脱氨),2,4-二氧代戊酸脱羧酶,3-氧代丁醛还原酶(还原酮),3-氧代丁醛还原酶 ),4-羟基-2-丁酮还原酶,AKP脱羧酶,4-氨基丁-2-酮氨基转移酶,4-氨基丁-2-酮氧化还原酶(脱氨基),4-氨基丁-2-酮氨裂解酶 乙酰乙酰辅酶A还原酶(CoA依赖性醛形成),乙酰乙酰辅酶A还原酶(CoA依赖性醇形成),乙酰乙酰辅酶A还原酶(酮 还原),3-羟基丁酰辅酶A还原酶(醛形成),3-羟基丁基 乙酰辅酶A还原酶(醇形成),4-羟基丁酰辅酶A脱水酶和巴豆酸酶。 一种生产1,3-BDO的方法包括在条件和足够的时间内培养这些微生物生产1,3-BDO。
    • 10. 发明申请
    • COMPOSITIONS AND METHODS FOR THE BIOSYNTHESIS OF 1,4-BUTANEDIOL AND ITS PRECURSORS
    • 1,4-丁二醇及其前体的生物合成的组合物和方法
    • WO2008115840A3
    • 2009-01-29
    • PCT/US2008057168
    • 2008-03-14
    • GENOMATICA INCBURK MARK JVAN DIEN STEPHEN JBURGARD ANTHONYNIU WEI
    • BURK MARK JVAN DIEN STEPHEN JBURGARD ANTHONYNIU WEI
    • C12P1/00
    • C12N15/52C12N9/0006C12N9/0008C12N9/88C12N9/93C12N15/70C12N15/81C12P7/18C12P7/42C12P7/52C12P17/04C12Y101/01061C12Y102/01076C12Y401/01071C12Y602/01004Y02P20/52
    • The invention provides a non-naturally occurring microbial biocatalyst including a microbial organism having a 4-hydroxybutanoic acid (4-HB) biosynthetic pathway having at least one exogenous nucleic acid encoding 4-hydroxybutanoate dehydrogenase, succinyl-CoA synthetase, CoA-dependent succinic semialdehyde dehydrogenase, or a-ketoglutarate decarboxylase, wherein the exogenous nucleic acid is expressed in sufficient amounts to produce monomeric 4-hydroxybutanoic acid (4-HB). Also provided is a non-naturally occurring microbial biocatalyst including a microbial organism having 4-hydroxybutanoic acid (4-HB) and 1,4-butanediol (BDO) biosynthetic pathways, the pathways include at least one exogenous nucleic acid encoding 4-hydroxybutanoate dehydrogenase, succinyl-CoA synthetase, CoA-dependent succinic semialdehyde dehydrogenase, 4-hydroxybutyrate:CoA transferase, 4-butyrate kinase, phosphotransbutyrylase, a-ketoglutarate decarboxylase, aldehyde dehydrogenase, alcohol dehydrogenase or an aldehyde/alcohol dehydrogenase, wherein the exogenous nucleic acid is expressed in sufficient amounts to produce 1,4- butanediol (BDO). Additionally provided is a method for the production of 4-HB. The method includes culturing a non-naturally occurring microbial organism having a A- hydroxybutanoic acid (4-HB) biosynthetic pathway including at least one exogenous nucleic acid encoding 4-hydroxybutanoate dehydrogenase, succinyl-CoA synthetase, CoA-dependent succinic semialdehyde dehydrogenase or a-ketoglutarate decarboxylase under substantially anaerobic conditions for a sufficient period of time to produce monomeric A- hydroxybutanoic acid (4-HB). Further provided is a method for the production of BDO. The method includes culturing a non-naturally occurring microbial biocatalyst, comprising a microbial organism having 4-hydroxybutanoic acid (4-HB) and 1,4-butanediol (BDO) biosynthetic pathways, the pathways including at least one exogenous nucleic acid encoding 4-hydroxybutanoate dehydrogenase, succinyl-CoA synthetase, CoA-dependent succinic semialdehyde dehydrogenase, 4-hydroxybutyrate:CoA transferase, 4-hydroxybutyrate kinase, phosphotranshydroxybutyrylase, a-ketoglutarate decarboxylase, aldehyde dehydrogenase, alcohol dehydrogenase or an aldehyde/alcohol dehydrogenase for a sufficient period of time to produce 1,4-butanediol (BDO). The 4-HB and/or BDO products can be secreted into the culture medium.
    • 本发明提供了一种非天然存在的微生物生物催化剂,其包括具有4-羟基丁酸(4-HB)生物合成途径的微生物生物,其具有至少一种编码4-羟基丁酸脱氢酶的外源核酸,琥珀酰辅酶A合成酶,CoA依赖性琥珀酸半醛 脱氢酶或α-酮戊二酸脱羧酶,其中外源核酸以足够的量表达以产生单体4-羟基丁酸(4-HB)。 还提供了非天然存在的微生物生物催化剂,其包括具有4-羟基丁酸(4-HB)和1,4-丁二醇(BDO)生物合成途径的微生物生物,该途径包括至少一种编码4-羟基丁酸脱氢酶的外源核酸 ,琥珀酰辅酶A合成酶,CoA依赖性琥珀酸半醛脱氢酶,4-羟基丁酸酯:CoA转移酶,4-丁酸酯激酶,磷酸转移酶,α-酮戊二酸脱羧酶,醛脱氢酶,醇脱氢酶或醛/醇脱氢酶,其中外源核酸为 以足够的量表示产生1,4-丁二醇(BDO)。 另外提供了生产4-HB的方法。 该方法包括培养具有4-羟基丁酸(4-HB)生物合成途径的非天然存在的微生物生物,其包含至少一种编码4-羟基丁酸脱氢酶的外源核酸,琥珀酰辅酶A合成酶,辅酶A依赖性琥珀酸半醛脱氢酶或 - 酮戊二酸脱羧酶在充分的厌氧条件下持续足够的时间以产生单体的4-羟基丁酸(4-HB)。 还提供了用于生产BDO的方法。 该方法包括培养非天然存在的微生物生物催化剂,其包含具有4-羟基丁酸(4-HB)和1,4-丁二醇(BDO)生物合成途径的微生物生物,该途径包括至少一种编码4- 羟基丁酸脱氢酶,琥珀酰-CoA合成酶,CoA依赖性琥珀酸脱氢酶,4-羟基丁酸酯:CoA转移酶,4-羟基丁酸酯激酶,磷酸转移羟基丁酸酶,α-酮戊二酸脱羧酶,醛脱氢酶,醇脱氢酶或醛/醇脱氢酶, 时间来生产1,4-丁二醇(BDO)。 4-HB和/或BDO产物可以分泌到培养基中。