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    • 54. 发明授权
    • System and method for programmable illumination pattern generation
    • 用于可编程照明图案生成的系统和方法
    • US07057704B2
    • 2006-06-06
    • US10098604
    • 2002-03-16
    • Michael SeulChiu Wo Chau
    • Michael SeulChiu Wo Chau
    • G03B27/42G03B27/72
    • G01N21/6456B01L3/502761B01L2200/0668B01L2300/089B01L2400/0415G01N21/6428G01N21/6452G01N2021/6463G01N2021/6478
    • An apparatus providing programmable illumination pattern generation for the manipulation of colloidal particulates and biomolecules in suspension between electrodes, is disclosed. The apparatus implements LEAPS (Light-controlled electrokinetic assembly of particles near surfaces), which relies on: AC electric field-induced assembly of particles: the patterning of the electrolyte/silicon oxide/silicon interface to exert spatial control over the assembly process; and the real-time control of the assembly process via external illumination. The apparatus generates patterns of illumination and projects them on to planar surfaces. i.e., a LEAPS electrode. This enables the creation of patterns using graphical design or drawing software on a personal computer and the projection of said patterns, or sequences of patterns (“time-varying patterns”), onto the interface using a liquid crystal display (LCD) panel and an optical design which images the LCD panel onto the surface of interest, to provide for arrangements and assembly of particles in such patterns.
    • 公开了一种提供用于在电极之间悬浮的胶体颗粒和生物分子的操作的可编程照明图案生成的装置。 该装置实现LEAPS(表面附近的颗粒的光控电动组装),其依赖于:AC电场引起的颗粒组装:电解质/氧化硅/硅界面的图案化以对组装过程施加空间控制; 并通过外部照明实现对装配过程的实时控制。 该设备产生照明模式并将它们投影到平面上。 即LEAPS电极。 这使得能够使用个人计算机上的图形设计或绘图软件来创建图案,并且使用液晶显示器(LCD)面板将所述图案或图案序列(“时变图案”)投影到界面上 将LCD面板成像到感兴趣的表面上的光学设计,以提供这种图案中的颗粒的布置和装配。
    • 55. 发明申请
    • Automated analysis of multiplexed probe-target interaction patterns: pattern matching and allele identification
    • 多重探针 - 目标相互作用模式的自动分析:模式匹配和等位基因识别
    • US20060025930A1
    • 2006-02-02
    • US10909638
    • 2004-08-02
    • Xiongwu XiaMichael Seul
    • Xiongwu XiaMichael Seul
    • G01N33/48G01N33/50G06F19/00
    • C12Q1/6827G06F19/18G06F19/22
    • Disclosed are methods and algorithms (and their implementation) supporting the automated analysis and interactive review and refinement (“redaction”) of the analysis within an integrated software environment, for automated allele assignments. The implementation, preferably with a software system and a program referred to as the Automated Allele Assignment (“AAA”) program, provides a multiplicity of functionalities including: data management by way of an integrated interface to a portable database to permit visualizing, importing, exporting and creating customizable summary reports; system configuration (“Set-up”) including user authorization, training set analysis and probe masking; Pattern Analysis including string matching and probe flipping; and Interactive Redaction combining real-time database computations and “cut-and-paste” editing, generating “warning” statements and supporting annotation. It also includes a thresholding function, a method of setting thresholds, a method of refining thresholds by matching an experimental binary string (“reaction pattern”) setting for that probe, probe masking of signals produced by probes which do not contribute significantly to discriminating among alleles.
    • 公开的方法和算法(及其实现)支持在集成软件环境中进行自动化等位基因分配的自动分析和交互式审查和细化(“编辑”)分析。 优选地使用软件系统和称为自动等位基因分配(“AAA”)程序的程序的实现提供了多种功能,包括:通过与便携式数据库的集成接口的数据管理,以允许可视化,导入, 出口和创建可定制的汇总报告; 系统配置(“设置”),包括用户授权,训练集分析和探测屏蔽; 模式分析包括字符串匹配和探针翻转; 和Interactive Redaction将实时数据库计算和“剪切和粘贴”编辑相结合,生成“警告”语句和支持注释。 它还包括阈值功能,设置阈值的方法,通过匹配用于该探针的实验二进制串(“反应模式”)设置来精确化阈值的方法,探针对由探针产生的信号进行探针掩蔽,所述探针不对显着区别于 等位基因
    • 58. 发明授权
    • Method for determining an allele profile of nucleic acid
    • 确定核酸等位基因谱的方法
    • US09428799B2
    • 2016-08-30
    • US13190147
    • 2011-07-25
    • Michael Seul
    • Michael Seul
    • G01N33/48C12Q1/68G06F19/20
    • C12Q1/6858G06F19/20C12Q2535/125C12Q2537/143C12Q2563/149C12Q2563/179
    • A method of identifying alleles of polymorphic sites in a plurality of nucleic acid samples including the steps of determining a source tag sharing number “d” for each of the alleles; performing a first reaction in a plurality of pools of the alleles to be identified to produce reaction products including a source tag identifying said each pool; pooling the pools to provide pooled pools; for each of the alleles to be identified, performing a second reaction using said reaction products to produce allele-specific second reaction products comprising a marker tag and a derived source tag; identifying said allele-specific second reaction products to identify the alleles. If “d” is equal to or larger than a maximum pool size, the first reaction may not be performed. Alleles may be binned together. A microparticle comprising one or more capture probes each comprising an oligonucleotide complementary to a subsequence of a target polynucleotide.
    • 一种鉴定多个核酸样品中多态位点的等位基因的方法,包括确定每个等位基因的源标签共有数“d”的步骤; 在要识别的等位基因的多个池中进行第一反应以产生包括识别所述每个池的源标签的反应产物; 集中池塘提供池池; 对于待鉴定的每个等位基因,使用所述反应产物进行第二反应以产生包含标记标签和衍生源标签的等位基因特异性第二反应产物; 识别所述等位基因特异性第二反应产物以鉴定等位基因。 如果“d”等于或大于最大池大小,则可能不执行第一反应。 等位基因可以合并在一起。 一种包含一种或多种捕获探针的微粒,每个捕获探针包含与靶多核苷酸的亚序列互补的寡核苷酸。
    • 60. 发明申请
    • METHOD FOR DETERMINING AN ALLELE PROFILE OF NUCLEIC ACID
    • 用于确定核酸的等位基因的方法
    • US20130029857A1
    • 2013-01-31
    • US13190147
    • 2011-07-25
    • Michael Seul
    • Michael Seul
    • C40B30/04C40B30/10C07H21/00C40B30/00
    • C12Q1/6858G06F19/20C12Q2535/125C12Q2537/143C12Q2563/149C12Q2563/179
    • A method of identifying alleles of polymorphic sites in a plurality of nucleic acid samples including the steps of determining a source tag sharing number “d” for each of the alleles; performing a first reaction in a plurality of pools of the alleles to be identified to produce reaction products including a source tag identifying said each pool; pooling the pools to provide pooled pools; for each of the alleles to be identified, performing a second reaction using said reaction products to produce allele-specific second reaction products comprising a marker tag and a derived source tag; identifying said allele-specific second reaction products to identify the alleles. If “d” is equal to or larger than a maximum pool size, the first reaction may not be performed. Alleles may be binned together. A microparticle comprising one or more capture probes each comprising an oligonucleotide complementary to a subsequence of a target polynucleotide.
    • 一种确定多个核酸样品中多态性位点的等位基因的方法,包括以下步骤:确定每个等位基因的源标签共享数d; 在要识别的等位基因的多个池中进行第一反应以产生包括识别所述每个池的源标签的反应产物; 集中池塘提供池池; 对于待鉴定的每个等位基因,使用所述反应产物进行第二反应以产生包含标记标签和衍生源标签的等位基因特异性第二反应产物; 识别所述等位基因特异性第二反应产物以鉴定等位基因。 如果d等于或大于最大池大小,则可能不执行第一反应。 等位基因可以合并在一起。 一种包含一种或多种捕获探针的微粒,每个捕获探针包含与靶多核苷酸的亚序列互补的寡核苷酸。