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    • 4. 发明授权
    • Nucleic acid sequence identification
    • 核酸序列鉴定
    • US07001721B1
    • 2006-02-21
    • US09700732
    • 1999-05-20
    • David Mark WhitcombeDuncan GrahamWilliam Ewen Smith
    • David Mark WhitcombeDuncan GrahamWilliam Ewen Smith
    • C12Q1/68C12N15/00C12N15/63C12N1/20C07H21/04
    • C12Q1/6825G01N21/658C12Q2565/632C12Q2565/107C12Q2563/155
    • Disclosed are methods for determining the presence or absence of a target nucleic acid (e.g. DNA) sequence in a sample nucleic acid, the method comprising: (a) exposing the sample to a detection agent comprising a colloid metal surface associated with a SER(R)S active species (SAS) such as an azo dye and with a target binding species (TBS) which may be PNA which is complementary to the target, and (b) observing the sample agent mixture using SER(R)S to detect any surface enhancement of the label wherein the binding of the TBS to the target sequence causes surface enhancement SAS. The detection agent may be exposed to the sample in step (a) as two or more separate components and will generally comprise a first agent and a second agent each having a different TBS, each TBS being capable of binding to the target sequence, and wherein the binding of the first and second TBS to the target sequence brings a metal surface associated with each TBS into proximity thereby causing surface enhancement of an SAS associated with one or both of the metal surfaces.
    • 公开了用于确定样品核酸中靶核酸(例如DNA)序列的存在或不存在的方法,所述方法包括:(a)将样品暴露于包含与SER(R )S活性物质(SAS),例如偶氮染料和具有目标结合物质(TBS),其可以是与靶互补的PNA,和(b)使用SER观察样品试剂混合物以检测任何 标签的表面增强,其中TBS与靶序列的结合导致表面增强SAS。 检测剂可以在步骤(a)中作为两个或更多个单独的组分暴露于样品,并且通常包含每个具有不同TBS的第一试剂和第二试剂,每个TBS能够结合靶序列,其中 第一和第二TBS与靶序列的结合使得与每个TBS相关联的金属表面接近,从而引起与一个或两个金属表面相关联的SAS的表面增强。
    • 5. 发明授权
    • Detection of nucleic acids and nucleic acid units
    • 检测核酸和核酸单位
    • US6127120A
    • 2000-10-03
    • US983486
    • 1998-04-21
    • Duncan GrahamAdrian Matthew Thornton LinacreCallum Hugh MunroWilliam Ewan SmithNigel Dean WatsonPeter Cyril White
    • Duncan GrahamAdrian Matthew Thornton LinacreCallum Hugh MunroWilliam Ewan SmithNigel Dean WatsonPeter Cyril White
    • G01N33/543C07D249/18C12N15/09C12Q1/68G01N21/65G01N33/566C07H19/00C07H21/04G01N33/553
    • C12Q1/6816G01N21/658Y10T436/24
    • The invention relates to the detection of target nucleic acids or nucleic acid units in a sample, by obtaining a SER(R)S spectrum for a SER(R)S-active complex containing, or derived directly from, the target. The complex includes at least a SER(R)S-active label, and optionally a target binding species containing a nucleic acid or nucleic acid unit. In this detection method, the concentration of the target present in the SER(R)S-active complex, or of the nucleic acid or unit contained in the target binding species in the SER(R)S-active complex, is no higher than 10.sup.-10 moles per liter. Additionally or alternatively, one or more of the following features may be used with the method: i) the introduction of a polyamine; ii) modification of the target, and/or of the nucleic acid or nucleic acid unit contained in the target binding species, in a manner that promotes or facilitates its chemi-sorption onto a SER(R)S-active surface; iii) inclusion of a chemi-sorptive functional group in the SER(R)S-active label. The invention also provides SER(R)S-active complexes for use in such a method, a kit for use in carrying out the method or preparing the complexes and a method for sequencing a nucleic acid which comprises the use of the detection method to detect at least one target nucleotide or sequence of nucleotides within the acid.
    • PCT No.PCT / GB96 / 01830 Sec。 371日期:1998年4月21日 102(e)1998年4月21日PCT PCT 1996年7月25日PCT公布。 出版物WO97 / 05280 日期1997年2月13日本发明涉及检测样品中的靶核酸或核酸单元,通过获得含有或直接从其中衍生的S(S)活性复合物的SER(S)S光谱, 目标。 所述复合物包括至少一种SER(R)S-活性标记,以及任选的含有核酸或核酸单元的靶结合物质。 在该检测方法中,SER(R)S-活性复合物中存在的靶标或SER(S)活性复合物中目标结合物中所含的核酸或单元的浓度不高于 10-10摩尔/升。 另外或替代地,可以使用以下方法中的一个或多个以下特征:i)引入多胺; ii)以促进或促进其对SER活性表面的化学吸附的方式修饰靶,和/或包含在靶结合物种中的核酸或核酸单元; iii)在SER(R)S活性标签中包含化学吸附官能团。 本发明还提供了用于这种方法的SER(R)S-活性复合物,用于实施该方法或制备复合物的试剂盒和核酸测序方法,其包括使用检测方法检测 酸中的至少一个靶核苷酸或核苷酸序列。
    • 9. 发明申请
    • Nucleic acid sequence identification
    • 核酸序列鉴定
    • US20060246460A1
    • 2006-11-02
    • US10569698
    • 2004-08-26
    • Duncan GrahamWilliam SmithLjiljana Fruk
    • Duncan GrahamWilliam SmithLjiljana Fruk
    • C12Q1/68C07H21/04
    • G01N21/658G01J3/44G01N2021/653
    • The invention provides modified molecular beacons detectable by surface enhanced Raman spectroscopy (SERS) and related materials, processes, and methods of use. Examples methods provide for the determination of the presence or absence of a target nucleotide sequence in a sample nucleic acid by (a) providing a detection agent, which agent comprises: (i) a probe comprising a target complement sequence (TCS) being complementary to the target sequence and flanking the TCS, first and second oligonucleotide arms, said first and second oligonucleotide arms forming a stem duplex, and said first arm incorporating a first label moiety being detectable by SERS (e.g. a fluoroscein dye) and said second arm terminating in a second label moiety being detectable by SERS, which second arm further includes a surface seeking group (SSG—e.g. an azo-benzotriazole) capable of promoting association of the second label onto an enhancing surface ii) associated with said probe via said SSG, an enhancing surface, such that said first and second label moieties are in close proximity to each other and to the enhancing surface (b) exposing the sample to the detection agent, (c) detecting hybridisation of the TCS to any target sequence present in the sample by a change in the SERS spectra of said agent.
    • 本发明提供通过表面增强拉曼光谱(SERS)和相关材料,方法和使用方法可检测的修饰分子信标。 实例方法通过(a)提供检测剂来确定样品核酸中靶核苷酸序列的存在或不存在,所述检测剂包括:(i)包含与SEQ ID NO:1的互补序列的靶互补序列(TCS)的探针 所述靶序列和所述TCS第一和第二寡核苷酸臂的侧翼,所述第一和第二寡核苷酸臂形成茎双相,并且所述第一臂结合第一标记部分可被SERS(例如氟代染料染料)检测,所述第二臂终止于 第二标记部分可由SERS检测,该第二臂还包括能够促进第二标记与经由所述SSG与所述探针相关联的增强表面ii)的表面寻找组(SSG,例如偶氮 - 苯并三唑), 使得所述第一和第二标签部分彼此靠近并且与所述增强表面(b)将样品暴露于检测剂 ,(c)通过所述试剂的SERS光谱的变化来检测TCS与样品中存在的任何靶序列的杂交。
    • 10. 发明授权
    • Detection system
    • 检测系统
    • US08632964B2
    • 2014-01-21
    • US12475141
    • 2009-05-29
    • Robert StokesDuncan Graham
    • Robert StokesDuncan Graham
    • C12Q1/00
    • C12Q1/00G01N21/658G01N33/54373G01N33/6803
    • The present invention relates to methods of making nanoarrays for use in detecting species formed on the surface of the array using SE(R)RS. The methods can involve nanolithographic printing of a compound by dip pen nanolithographic printing. A SE(R)RS substrate can be used for the array and which can be selected from surfaces roughened by the oxidation-reduction cycle (ORC), island films, colloidal nanoparticles and surface-confined nanostructures. A coating or intermediate layer, such as a layer formed of nitrocellulose, can be provided between the compound and the SE(R)RS substrate. There are also provided arrays themselves and methods of using such arrays.
    • 本发明涉及使用SE(RS)RS制备用于检测在阵列表面上形成的物质的纳米阵列的方法。 这些方法可以涉及通过浸渍笔纳米光刻印刷的化合物的纳米光刻印刷。 可以使用SE(R)RS衬底作为阵列,其可以从通过氧化还原循环(ORC),岛膜,胶体纳米颗粒和表面限制的纳米结构粗糙化的表面中选择。 可以在化合物和SE(R)RS底物之间提供涂层或中间层,例如由硝酸纤维素形成的层。 还提供了数组本身和使用这些数组的方法。