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    • 2. 发明申请
    • DECONVOLUTION METHOD FOR THE ANALYSIS OF DATA RESULTING FROM ANALYTICAL SEPARATION PROCESSES
    • 分析分析数据分解方法的解卷积方法
    • WO1997022942A1
    • 1997-06-26
    • PCT/US1996019242
    • 1996-12-02
    • THE PERKIN-ELMER CORPORATION
    • THE PERKIN-ELMER CORPORATIONALLISON, Daniel, B.BOWLBY, James, O., Jr.
    • G06F19/00
    • G06K9/00503G01N30/8617
    • An improved signal processing method in a signal processor for performing the deconvolution of a signal resulting from an analytical separation process is disclosed. In a first aspect, a signal representing a plurality of partially separated sample zones is measured, a point-spread-function of the signal is determined, and the Fourier transform of the signal and the point-spread-function is taken. Next, a noise component n of the signal is determined and the value of a result signal A(f) is calculated using the following filter A(f) = (D(f)P*(f))/P*(f)P(f) + n , where D(f) is the Fourier transform of the signal, P(f) is the Fourier transform of the point-spread-function, and P*(f) is the complex conjugate of P(f). Finally, the inverse Fourier transform of the result A(f) is taken and reported as A(t). Preferably, the point-spread-function is a Gaussian function having a standard deviation sigma , where sigma is determined using either an alpha beta tracker or the function . sigma =(a+bt ) , where a and b are constants. In a second aspect of the invention, a plurality of possible point-spread-functions of the signal are determined and the above-described method is applied using each PSF. The value of the largest point-spread-function which provides a non-negative result is determined, and the associated value of A(t) is reported. In a third aspect of the invention, a program storage device readable by a machine, tangibly embodying a program of instructions executable by a machine to perform the method steps of the first or the second aspects of the invention is provided.
    • 公开了一种用于执行由分析分离过程产生的信号的去卷积的信号处理器中的改进的信号处理方法。 在第一方面,测量表示多个部分分离的采样区域的信号,确定信号的点扩展函数,并且采用信号的傅立叶变换和点扩展函数。 接下来,使用以下滤波器A(f)=(D(f)P *(f))/ P *(f)来确定信号的噪声分量n,并计算结果信号A(f) P(f)+ n,其中D(f)是信号的傅立叶变换,P(f)是点扩展函数的傅里叶变换,P *(f)是P(f) )。 最后,得到结果A(f)的傅里叶逆变换并报告为A(t)。 优选地,点扩散函数是具有标准偏差σ的高斯函数,其中使用αβ跟踪器或函数来确定σ。 sigma =(a + bt <2))1/2,其中a和b是常数。 在本发明的第二方面中,确定信号的多个可能的点扩展函数,并且使用每个PSF应用上述方法。 确定提供非负结果的最大点扩展函数的值,并报告相关值A(t)。 在本发明的第三方面中,提供了一种由机器可读的程序存储装置,其有形地体现了可由机器执行的指令程序,以执行本发明的第一或第二方面的方法步骤。
    • 3. 发明申请
    • METHOD AND APPARATUS FOR REDUCING THE DISTORTION OF A SAMPLE ZONE ELUTING FROM A CAPILLARY ELECTROPHORESIS CAPILLARY
    • 用于减少毛细管电泳毛细血管样品区域失调的方法和装置
    • WO1998026280A1
    • 1998-06-18
    • PCT/US1997020199
    • 1997-11-11
    • THE PERKIN-ELMER CORPORATION
    • THE PERKIN-ELMER CORPORATIONNORDMAN, Eric, S.
    • G01N27/447
    • G01N27/44717
    • An electrophoresis system including means for reducing the distortion of a sample zone eluting from a capillary electrophoresis separation capillary is disclosed. The system includes one or more separation capillaries, each separation capillary having an inlet end and an outlet end; a first electrode in electrical communication with the inlet ends of the separation capillaries; a second electrode in electrical communication with the outlet ends of the separation capillaries; and one or more focusing electrodes in electrical communication with the outlet ends of the separation capillaries. In operation, the voltage of each of the electrodes is adjusted such that (i) the sample zone is transported from the inlet end to the outlet end of the separation capillaries and (ii) the distortion of the sample zone eluting from the separation capillaries is reduced.
    • 公开了一种包括用于减少从毛细管电泳分离毛细管洗脱的样品区变形的装置的电泳系统。 该系统包括一个或多个分离毛细管,每个分离毛细管具有入口端和出口端; 与分离毛细管的入口端电连通的第一电极; 与分离毛细管的出口端电连通的第二电极; 以及一个或多个聚焦电极与分离毛细管的出口端电连通。 在操作中,调节每个电极的电压,使得(i)样品区域从分离毛细管的入口端输出到出口端,和(ii)从分离毛​​细管洗脱的样品区域的变形是 降低。
    • 4. 发明申请
    • PRIMER EXTENSION REACTION UTILIZING A COSUBSTRATE-ENZYME PAIR FOR CONSUMING PYROPHOSPHATE
    • 用于消耗磷酸氢盐的组合物酶的初步扩展反应
    • WO1998015655A1
    • 1998-04-16
    • PCT/US1997017301
    • 1997-09-26
    • THE PERKIN-ELMER CORPORATION
    • THE PERKIN-ELMER CORPORATIONCHEN, Shiaw-Min
    • C12Q01/68
    • C12Q1/6848C12Q1/6869C12Q2565/301C12Q2527/127
    • An improved method for performing a primer extension reaction is disclosed, such method including the steps of annealing an oligonucleotide primer to a portion of a template nucleic acid thereby forming a primer-template hybrid; adding primer-extension reagents to the primer-template hybrid for extending the primer; and adding a cosubstrate-enzyme pair to the primer-template hybrid for conducting a pyrophosphate-utilizing reaction, thereby reducing the amount of pyrophosphate present in the reaction. In a particularly preferred embodiment, the cosubstrate-enzyme pair comprises pyrophosphate dependent phosphofructose kinase and fructose-6-phosphate, or UDP glucose pyrophosphorylase and UDP glucose. The invention further includes kits and solutions useful for carrying out the methods of the invention.
    • 公开了改进的引物延伸反应的方法,该方法包括以下步骤:将寡核苷酸引物退火至模板核酸的一部分,从而形成引物 - 模板杂交体; 向引物 - 模板杂交体中加入引物延伸试剂以延伸引物; 并向引物 - 模板杂交体添加一个辅助 - 酶对以进行焦磷酸盐利用反应,从而减少反应中存在的焦磷酸盐的量。 在一个特别优选的实施方案中,同位素 - 酶对包含焦磷酸依赖性磷酸果糖激酶和果糖-6-磷酸,或UDP葡萄糖焦磷酸化酶和UDP葡萄糖。 本发明还包括用于实施本发明方法的试剂盒和溶液。
    • 5. 发明申请
    • 4,7-DICHLORORHODAMINE DYES
    • 4,7-二氯丹染色体
    • WO1997049769A1
    • 1997-12-31
    • PCT/US1997008797
    • 1997-05-21
    • THE PERKIN-ELMER CORPORATION
    • THE PERKIN-ELMER CORPORATIONLEE, LindaBENSON, Scott, C.ROSENBLUM, Barnett, B.SPUNGEON, Sandra, L.
    • C09B11/24
    • C07H21/00C09B11/24
    • A class of 4,7-dichlororhodamine compounds useful as fluorescent dyes are disclosed having structure formula (I) wherein R1-R6 are hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group, or combinations thereof, or, when taken together, R1 and R6 is benzo, or, when taken together, R4 and R5 is benzo; Y1-Y4 are hydrogen or lower alkyl, or, when taken together, Y1 and R2 is propano and Y2 and R1 is propano, or, when taken together, Y3 and R3 is propano and Y4 and R4 is propano; and X1-X3 taken separately are selected from the group consisting of hydrogen, chlorine, fluorine, lower alkyl, carboxylate, sulfonic acid, -CH2OH, and a linking group. In another aspect, the invention includes reagents labeled with the 4,7-dichlororhodamine dye compounds, including deoxynucleotides, dideoxynucleotides, and polynucleotides. In an additional aspect, the invention includes methods utilizing such dye compounds and reagents including dideoxy polynucleotide sequencing and fragment analysis methods.
    • 公开了一类用作荧光染料的4,7-二氯罗丹明化合物,其具有结构式(I),其中R 1 -R 6是氢,氟,氯,低级烷基,低级烯,低级炔,磺酸酯,砜,氨基,酰氨基,腈 ,低级烷氧基,连接基团或它们的组合,或者当R 1和R 6一起时为苯并,或者合并时,R 4和R 5为苯并; Y1-Y4为氢或低级烷基,当Y1和R2为丙酰基时,Y 1和R 2为丙酰基,或者当Y 3和R 3为丙酰基时,Y 4和R 4为丙酰基; 和分别选择的X1-X3选自氢,氯,氟,低级烷基,羧酸酯,磺酸,-CH 2 OH和连接基团。 另一方面,本发明包括用4,7-二氯罗丹明染料化合物标记的试剂,包括脱氧核苷酸,双脱氧核苷酸和多核苷酸。 在另一方面,本发明包括利用这种染料化合物的方法和包括双脱氧多核苷酸测序和片段分析方法的试剂。