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    • 1. 发明申请
    • Single-Point Genome Signature Tags
    • 单点基因组签名标签
    • US20090011511A1
    • 2009-01-08
    • US11925382
    • 2007-10-26
    • John J. DunnDaniel van der LelieMaureen K. KrauseSean R. McCorkle
    • John J. DunnDaniel van der LelieMaureen K. KrauseSean R. McCorkle
    • C12Q1/68
    • C12Q1/6809C12Q1/6827C12Q2525/191C12Q2525/131C12Q2521/313C12Q2537/159C12Q2537/164C12Q2563/131
    • Disclosed is a method for analyzing the organismic complexity of a sample through analysis of the nucleic acid in the sample. In the disclosed method, through a series of steps, including digestion with a type II restriction enzyme, ligation of capture adapters and linkers and digestion with a type IIS restriction enzyme, genome signature tags are produced. The sequences of a statistically significant number of the signature tags are determined and the sequences are used to identify and quantify the organisms in the sample. Various embodiments of the invention described herein include methods for using single point genome signature tags to analyze the related families present in a sample, methods for analyzing sequences associated with hyper- and hypo-methylated CpG islands, methods for visualizing organismic complexity change in a sampling location over time and methods for generating the genome signature tag profile of a sample of fragmented DNA.
    • 公开了通过分析样品中的核酸来分析样品的生物复杂性的方法。 在所公开的方法中,通过一系列步骤,包括用II型限制酶消化,连接捕获适配器和接头并用IIS限制酶消化,产生基因组签名标签。 确定统计学上显着数量的签名标签的序列,并且使用该序列来鉴定和量化样品中的生物体。 本文描述的本发明的各种实施方案包括使用单点基因组签名标签分析样品中存在的相关家族的方法,用于分析与超低甲基化和次甲基化CpG岛相关的序列的方法,用于可视化取样中的有机体复杂性变化的方法 随着时间推移的位置以及用于产生片段化DNA样品的基因组特征标签谱的方法。