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    • 2. 发明申请
    • Method and system for synchronizing protein information of PPI network DB
    • PPI网络数据库的蛋白质信息同步方法和系统
    • US20070136002A1
    • 2007-06-14
    • US11635579
    • 2006-12-08
    • Jae ChoiJong ParkMyung LimSeon Park
    • Jae ChoiJong ParkMyung LimSeon Park
    • G06F19/00
    • G16B50/00G16B20/00
    • A method and system for keeping a protein-protein interaction (PPI) network database (DB) up-to-date by synchronizing protein information present in the PPI network DB with protein information present in a public DB which is frequently updated and is provided to the public are provided. The method of synchronizing protein information of a protein-protein interaction (PPI) network database (DB) includes: (a) choosing a protein from a PPI network DB which stores a plurality of pieces of PPI information; (b) receiving up-to-date protein information corresponding to the chosen protein from a global protein DB which stores a plurality of pieces of up-to-date protein information that can be provided to the public, and keeping the local protein DB up-to-date by performing a global synchronization operation on a local protein DB such that protein information which corresponds to the chosen protein and is present in the local protein DB can be updated with the received up-to-date protein information, the local protein DB storing a plurality of pieces of protein information corresponding to the PPI network DB; and (c) receiving updated protein information obtained through the global synchronization operation from the local protein DB, and keeping the PPI network up-to-date by performing a local synchronization operation on the PPI network DB such that protein information which corresponds to the chosen protein and is present in the PPI network DB can be updated with the received updated protein information.
    • 通过将PPI网络DB中存在的蛋白质信息与存在于公共DB中的蛋白质信息同步来保持蛋白质 - 蛋白质相互作用(PPI)网络数据库(DB)的最新方法和系统,所述蛋白质信息经常被更新并提供给 公众提供。 蛋白质 - 蛋白质相互作用(PPI)网络数据库(DB)的同步蛋白质信息的方法包括:(a)从存储多条PPI信息的PPI网络DB中选择蛋白质; (b)从全球蛋白质DB接收对应于所选择的蛋白质的最新蛋白质信息,其存储可以提供给公众的多条最新蛋白质信息,并保持局部蛋白质DB向上 通过对局部蛋白质DB进行全局同步操作,使得可以用接收到的最新蛋白质信息来更新对应于所选蛋白质并存在于局部蛋白质DB中的蛋白质信息,局部蛋白质 DB存储对应于PPI网络DB的多条蛋白质信息; 和(c)从本地蛋白质DB接收通过全局同步操作获得的更新的蛋白质信息,并且通过对PPI网络DB执行本地同步操作来保持PPI网络是最新的,使得与所选择的蛋白质信息相对应的蛋白质信息 蛋白质并存在于PPI网络DB中,可以用接收到的更新的蛋白质信息进行更新。
    • 5. 发明申请
    • Method of generating database schema to provide integrated view of dispersed data and data integrating system
    • 生成数据库模式以提供分散数据和数据集成系统的集成视图的方法
    • US20060136452A1
    • 2006-06-22
    • US11184623
    • 2005-07-19
    • Myung LimMyung ChungMyung BaeSeon Park
    • Myung LimMyung ChungMyung BaeSeon Park
    • G06F17/00
    • G06F16/84G06F16/211
    • A method for generating a database schema in order to generate an integrated view capable of obtaining desired data from data resources dispersed and stored in different formats in different locations, and an data integrating system are provided. The method includes rules for parsing the structure and contents of an database described in a specification language, generating a schema semantically corresponding to the database, and defining data items required for generating an integrated view. Also, in order to generate a global schema expressing an integrated view, part of XQuery grammar is introduced for local schemas expressing a single database, and a definition of standard expression for expressing a data view is included. Accordingly, an data integrating system can generate an integrated view for a variety of heterogeneous databases dispersed on a network by using a specification language, and post a query in real time.
    • 一种用于生成数据库模式的方法,以便产生能够从不同位置以不同格式分散和存储的数据资源获得所需数据的集成视图,以及数据集成系统。 该方法包括用于解析在规范语言中描述的数据库的结构和内容的规则,生成与数据库对应的语义模式,以及定义生成集成视图所需的数据项。 此外,为了生成表达集成视图的全局模式,引入了表示单个数据库的本地模式的XQuery语法的一部分,并且包括用于表达数据视图的标准表达式的定义。 因此,数据集成系统可以通过使用规范语言生成分散在网络上的各种异构数据库的集成视图,并实时发布查询。