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    • 5. 发明申请
    • SYSTEM AND METHOD FOR POLYMER NOTATION
    • 用于聚合物符号的系统和方法
    • WO0065521A3
    • 2001-10-25
    • PCT/US0010990
    • 2000-04-24
    • MASSACHUSETTS INST TECHNOLOGY
    • VENKATARAMAN GANESHSHRIVER ZACHARYRAMAN RAHULSASISEKHARAN RAMKEISER NISHLA
    • C08G85/00C07K1/00G06F17/30G06F19/00G06F19/28
    • G06F19/703C07K1/00G06F19/28Y10S707/99936Y10S707/99943
    • A data structure, tangibly embodied in a computer-readable medium, representing a polymer of chemical units is disclosed. The data structure includes an identifier including a plurality of fields for storing values corresponding to properties of the polymer. In one embodiment, the fields are capable of storing binary values. The polymer may, for example, be a polysaccharide and the chemical units may be saccharides. A computer-implemented method for determining whether properties of a query sequence of chemical units match properties of a polymer of chemical units. The query sequence is represented by a first data structure, tangibly embodied in a computer-readable medium, including an identifier including a plurality of bit fields for storing values corresponding to properties of the query sequence. The polymer is represented by a second data structure, tangibly embodied in a computer-readable medium, including an identifier including a plurality of bit fields for storing values corresponding to properties of the polymer. The invention also relates to methods of sequencing polymers such as nucleic acids, polypeptides and polysaccharides and methods for identifying a polysaccharide-protein interaction. The invention also involves a notational system referred to as Property Encoded Nomenclature.
    • 公开了一种有形地体现在表示化学单元的聚合物的计算机可读介质中的数据结构。 数据结构包括标识符,其包括用于存储与聚合物的性质对应的值的多个场。 在一个实施例中,这些字段能够存储二进制值。 聚合物可以是例如多糖,化学单元可以是糖。 用于确定化学单元的查询序列的属性是否匹配化学单元的聚合物的性质的计算机实现的方法。 查询序列由有形地体现在计算机可读介质中的第一数据结构表示,包括包括用于存储对应于查询序列的属性的值的多个位字段的标识符。 聚合物由有形地体现在计算机可读介质中的第二数据结构表示,包括标识符,其包括用于存储对应于聚合物的性质的值的多个位域。 本发明还涉及聚合物如核酸,多肽和多糖的测序方法以及鉴定多糖 - 蛋白质相互作用的方法。 本发明还涉及称为属性编码术语的符号系统。