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    • 3. 发明申请
    • DELTA-ENDOTOXIN GENES AND METHODS FOR THEIR USE
    • DELTA-内毒素基因及其使用方法
    • WO2004074462A2
    • 2004-09-02
    • PCT/US2004005829
    • 2004-02-20
    • ATHENIX CORPCAROZZI NADINEHARGISS TRACYKOZIEL MICHAEL GDUCK NICHOLAS BCARR BRIAN
    • CAROZZI NADINEHARGISS TRACYKOZIEL MICHAEL GDUCK NICHOLAS BCARR BRIAN
    • C07K14/325C12N15/82C12N
    • C12N15/8286C07K14/325Y02A40/162
    • Compositions and methods for conferring pesticidal activity to bacteria, plants, plant cells, tissues and seeds are provided. Compositions comprising a coding sequence for a delta-endotoxin and delta-endotoxin-associated polypeptides are provided. The coding sequences can be used in DNA constructs or expression cassettes for transformation and expression in plants and bacteria. Compositions also comprise transformed bacteria, plants, plant cells, tissues, and seeds. In particular, isolated delta-endotoxin and delta-endotoxin-associated nucleic acid molecules are provided. Additionally, amino acid sequences corresponding to the polynucleotides are encompassed. In particular, the present invention provides for isolated nucleic acid molecules comprising nucleotide sequences encoding the amino acid sequences shown in in SEQ ID NOS:3, 5, 7, 9, 11, 14, 16, 18, 20, 22, 24, 27, and 29, and the nucleotide sequences set forth in SEQ ID NOS:1, 2, 4, 6, 8, 10, 12, 13, 15, 17, 19, 21, 23, 25, 26, and 28, as well as variants and fragments thereof.
    • 提供了赋予细菌,植物,植物细胞,组织和种子的杀虫活性的组合物和方法。 提供了包含δ-内毒素和δ-内毒素相关多肽的编码序列的组合物。 编码序列可用于DNA构建体或表达盒中,用于在植物和细菌中转化和表达。 组合物还包括转化的细菌,植物,植物细胞,组织和种子。 特别地,提供了分离的δ-内毒素和δ-内毒素相关的核酸分子。 另外,包括对应于多核苷酸的氨基酸序列。 特别地,本发明提供了分离的核酸分子,其包含编码SEQ ID NO:3,5,7,9,11,14,16,18,20,22,24,27中所示的氨基酸序列的核苷酸序列 和29,以及SEQ ID NO:1,2,4,6,8,10,12,13,15,17,19,21,23,25,26和28所示的核苷酸序列,以及 作为其变体和片段。
    • 9. 发明申请
    • INTEGRATED SYSTEM FOR HIGH THROUGHPUT CAPTURE OF GENETIC DIVERSITY
    • 用于遗传多样性的高通量捕获的综合系统
    • WO03078582B1
    • 2004-04-15
    • PCT/US0307594
    • 2003-03-11
    • ATHENIX CORPDUCK NICHOLAS BKOZIEL MICHAEL GCAROZZI NADINECARR BRIANHARGISS TRACY
    • DUCK NICHOLAS BKOZIEL MICHAEL GCAROZZI NADINECARR BRIANHARGISS TRACY
    • C12Q1/68G01N33/48G01N33/50G06F19/22G06F19/00G06F17/30
    • G06F19/22C12Q1/6888C12Q1/689
    • Compositions and methods for rapid and highly efficient characterization of genetic diversity in organisms are provided. The methods involve rapid sequencing and characterization of extrachromosomal DNA, particularly plasmids, to identify and isolate useful nucleotide sequences. The method targets plasmid DNA and avoids repeated cloning and sequencing of the host chromosome, thus allowing one to focus on the genetic elements carrying maximum genetic diversity. The method involves generating a library of extrachromosomal DNA clones, sequencing a portion of the clones, comparing the sequences against a database of existing DNA sequences, using an algorithm to select said novel nucleotide sequence based on the presence or absence of said portion in a database, and identification of at least one novel nucleotide sequence. The DNA sequence can also be translated in all six frames and the resulting amino acid sequences can be compared against a database of protein sequences. The integrated approach provides a rapid and efficient method to identify and isolate useful genes. Organisms of particular interest include, but are not limited to bacteria, fungi, algae, and the like. Compositions comprise a mini-cosmid vector comprising a stuffer fragment and at least one cos site.
    • 提供了生物体遗传多样性快速高效表征的组成和方法。 该方法涉及染色体外DNA特别是质粒的快速测序和表征,以鉴定和分离有用的核苷酸序列。 该方法针对质粒DNA,避免宿主染色体的重复克隆和测序,从而允许人们集中在携带最大遗传多样性的遗传因素上。 该方法包括产生染色体外DNA序列文库,测序一部分克隆,比较序列与现有DNA序列的数据库,使用算法根据数据库中所述部分的存在或不存在来选择所述新的核苷酸序列 ,以及鉴定至少一个新的核苷酸序列。 DNA序列也可以在所有六个帧中翻译,并将得到的氨基酸序列与蛋白质序列的数据库进行比较。 综合方法提供了一种快速有效的方法来鉴定和分离有用的基因。 特别感兴趣的生物体包括但不限于细菌,真菌,藻类等。 组合物包含迷你粘粒载体,其包含填充片段和至少一个cos位点。
    • 10. 发明申请
    • A FAMILY OF PESTICIDAL PROTEINS AND METHODS FOR THEIR USE
    • 一种农药蛋白质及其使用方法
    • WO2007147096A3
    • 2008-07-24
    • PCT/US2007071298
    • 2007-06-15
    • ATHENIX CORPKOZIEL MICHAEL GDESAI NALINIDETER REBEKAHTOMSO DANIEL JOHNHARGISS TRACYDUCK NICHOLAS BCAROZZI NADINEGUO RONG
    • KOZIEL MICHAEL GDESAI NALINIDETER REBEKAHTOMSO DANIEL JOHNHARGISS TRACYDUCK NICHOLAS BCAROZZI NADINEGUO RONG
    • C07K14/195C07K14/32C12N15/82
    • C12N15/8286A01N37/44C07K14/325C12P21/02Y02A40/162
    • Compositions and methods for conferring pesticidal activity to bacteria, plants, plant cells, tissues and seeds are provided. Compositions comprising a coding sequence for pesticidal polypeptides are provided. The coding sequences can be used in DNA constructs or expression cassettes for transformation and expression in plants and bacteria. Compositions also comprise transformed bacteria, plants, plant cells, tissues, and seeds. In particular, isolated pesticidal nucleic acid molecules are provided. Additionally, amino acid sequences corresponding to the polynucleotides are encompassed. In particular, the present invention provides for isolated nucleic acid molecules comprising nucleotide sequences encoding the amino acid sequence shown in SEQ ID NO:2, 4, 6, 7, 9, 11, 13, 15, 17, 19, 21, 23, 25, 27, 29, 31, 33, 35, 37 or 61, the nucleotide sequence set forth in SEQ ID NO: 1, 3, 5, 8, 10, 12, 14, 16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, or 60, or the nucleotide sequence deposited in a bacterial host as Accession No. NRRL B-30961, B-30955, B-30956, B-30957, B-30958, B-30942, B-30939, B-30941, B-50047, B-50047, B-30959, B-30960, B-30943, B-50048, or B-50048, as well as variants and fragments thereof.
    • 提供了赋予细菌,植物,植物细胞,组织和种子的杀虫活性的组合物和方法。 提供了包含杀虫多肽的编码序列的组合物。 编码序列可用于DNA构建体或表达盒中,用于在植物和细菌中转化和表达。 组合物还包括转化的细菌,植物,植物细胞,组织和种子。 特别地,提供了分离的杀虫核酸分子。 另外,包括对应于多核苷酸的氨基酸序列。 特别地,本发明提供了分离的核酸分子,其包含编码SEQ ID NO: 25,27,29,31,33,35,37或61所述的核苷酸序列,所述核苷酸序列如SEQ ID NO:1,3,5,8,10,12,14,16,18,20,22,24, 26,28,30,32,34,36或60个核苷酸序列,或作为保藏号NRRL B-30961,B-30955,B-30956,B-30957,B-30958,B -30942,B-30939,B-30941,B-50047,B-50047,B-30959,B-30960,B-30943,B-50048或B-50048,以及它们的变体和片段。