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    • 3. 发明专利
    • Template-dependent ligation using pna-dna chimeric probe
    • 使用PNA-DNA CHIMERIC PROBE的模板依赖关系
    • JP2006055177A
    • 2006-03-02
    • JP2005329510
    • 2005-11-14
    • Applera Corpアプレラ コーポレイション
    • EGHOLM MICHAELCHEN CAIFU
    • C12N15/09G01N21/78C12Q1/68
    • C12Q1/6862
    • PROBLEM TO BE SOLVED: To provide chimeric molecules of PNA (peptide nucleic acid) and DNA monomer units, and their use in ligation methods to generate ligation products. SOLUTION: Disclosed is a method for producing a template-dependent ligation product, wherein the method comprises a process of enzymatically linking a PNA-DNA chimeric probe to a second probe in the presence of a template nucleic acid and ligase, wherein the chimeric probe has a PNA part and a DNA part and the DNA part has at least two nucleotides and 3' hydroxy terminus or 5' hydroxy terminus, wherein the chimeric probe and the second probe are respectively hybridized to the template nucleic acid and are adjacent each other, and wherein at least one part of the PNA part is hybridized to a template and the second probe is a PNA-DNA chimera or oligonucleotide. COPYRIGHT: (C)2006,JPO&NCIPI
    • 要解决的问题:提供PNA(肽核酸)和DNA单体单元的嵌合分子,以及它们在连接方法中的用途以产生连接产物。 解决方案:公开了一种制备模板依赖性连接产物的方法,其中该方法包括在模板核酸和连接酶存在下将PNA-DNA嵌合探针酶催化连接到第二探针的方法,其中 嵌合探针具有PNA部分和DNA部分,DNA部分具有至少两个核苷酸和3'羟基末端或5'羟基末端,其中嵌合探针和第二探针分别与模板核酸杂交并与每个 并且其中至少一部分PNA部分与模板杂交,第二探针是PNA-DNA嵌合体或寡核苷酸。 版权所有(C)2006,JPO&NCIPI
    • 4. 发明申请
    • ASYNCHRONOUS PRIMED PCR
    • 异步PRIMED PCR
    • WO0194638A3
    • 2003-07-10
    • PCT/US0118464
    • 2001-06-06
    • APPLERA CORP
    • CHEN CAIFUEGHOLM MICHAELHAFF LAWRENCE
    • G01N33/53C12N15/09C12Q1/68G01N33/566
    • C12Q1/686C12Q2561/101C12Q2527/113C12Q2527/107
    • An asynchronous thermal cycling protocol for nucleic acid amplification uses two primers with thermal melting temperatures different by about 10 to 30 DEG C. After the higher melting primer has annealed and polymerase mediated extension, the uncopied, single-stranded target sequence may be hybridized and detected by a probe. DNA probes may be cleaved by the exonuclease activity of a polymerase. The probe may be a non-cleaving analog such as PNA. When a probe is labelled with a reporter dye and a quencher selected to undergo energy transfer, e.g. FRET, fluorescence from the reporter dye may be effectively quenched when the probe is unbound. Upon hybridization of the probe to complementary target or upon cleavage while bound to target, the reporter dye is no longer quenched, resulting in a detectable amount of fluorescence. The second, lower-melting primer may be annealed and extended to generate a double-stranded nucleic acid. Amplification may be monitored in real time, including each cycle, or at the end point. The asynchronous PCR thermal cycling protocol can generate a preponderance of the PCR amplicon in single-stranded form by repetition at the end of the protocol of annealing and extension of the higher melting primer.
    • 用于核酸扩增的异步热循环方案使用两种引物,其热解温度不同于约10至30℃。在较高熔点的引物退火和聚合酶介导的延伸之后,未结合的单链靶序列可能被杂交和检测 通过探针。 DNA探针可能被聚合酶的外切核酸酶活性切割。 探针可以是非断裂的类似物,例如PNA。 当探针用报告染料和选择进行能量转移的猝灭剂标记时,例如, 当探针未结合时,来自报告染料的荧光可以被有效地淬灭。 当探针与互补靶物杂交时或在与靶标结合时进行切割时,报道染料不再猝灭,导致可检测量的荧光。 可以将第二种较低熔点的引物退火并延伸以产生双链核酸。 可以实时监测放大,包括每个周期,或在终点。 异构PCR热循环方案可以在退火和延伸较高熔点引物的方案结束时通过重复生成单链形式的PCR扩增子的优势。
    • 5. 发明申请
    • ASYNCHRONOUS PRIMED PCR
    • 异步PRIMED PCR
    • WO0194638A8
    • 2002-04-11
    • PCT/US0118464
    • 2001-06-06
    • APPLERA CORP
    • CHEN CAIFUEGHOLM MICHAELHAFF LAWRENCE
    • G01N33/53C12N15/09C12Q1/68G01N33/566
    • C12Q1/686C12Q2561/101C12Q2527/113C12Q2527/107
    • An asynchronous thermal cycling protocol for nucleic acid amplification uses two primers with thermal melting temperatures different by about 10 to 30 DEG C. After the higher melting primer has annealed and polymerase mediated extension, the uncopied, single-stranded target sequence may be hybridized and detected by a probe. DNA probes may be cleaved by the exonuclease activity of a polymerase. The probe may be a non-cleaving analog such as PNA. When a probe is labelled with a reporter dye and a quencher selected to undergo energy transfer, e.g. FRET, fluorescence from the reporter dye may be effectively quenched when the probe is unbound. Upon hybridization of the probe to complementary target or upon cleavage while bound to target, the reporter dye is no longer quenched, resulting in a detectable amount of fluorescence. The second, lower-melting primer may be annealed and extended to generate a double-stranded nucleic acid. Amplification may be monitored in real time, including each cycle, or at the end point. The asynchronous PCR thermal cycling protocol can generate a preponderance of the PCR amplicon in single-stranded form by repetition at the end of the protocol of annealing and extension of the higher melting primer.
    • 用于核酸扩增的异步热循环方案使用两种引物,其热解温度不同于约10至30℃。在较高熔点的引物退火和聚合酶介导的延伸之后,未结合的单链靶序列可能被杂交和检测 通过探针。 DNA探针可能被聚合酶的外切核酸酶活性切割。 探针可以是非断裂的类似物,例如PNA。 当探针用报告染料和选择进行能量转移的猝灭剂标记时,例如, 当探针未结合时,来自报告染料的荧光可以被有效地淬灭。 当探针与互补靶物杂交时或在与靶标结合时进行切割时,报道染料不再猝灭,导致可检测量的荧光。 可以将第二种较低熔点的引物退火并延伸以产生双链核酸。 可以实时监测放大,包括每个周期,或在终点。 异构PCR热循环方案可以在退火和延伸较高熔点引物的方案结束时通过重复生成单链形式的PCR扩增子的优势。