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    • 6. 发明申请
    • A RAPIDLY CONVERGENT METHOD FOR BOLTZMANN-WEIGHTED ENSEMBLE GENERATION IN FREE ENERGY SIMULATIONS
    • 一种用于自由能量模拟中的BOLTZMANN-WEIGHTING ENSEMBLE GENERATION的快速融合方法
    • WO1996012168A2
    • 1996-04-25
    • PCT/US1995012926
    • 1995-10-06
    • THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORKSTILL, W., ClarkGUARNIERI, FrankSENDEROWITZ, Hanoch
    • THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
    • G01N00/00
    • C07K1/00G06F19/701
    • The invention is directed to a method for generating possible conformations of a molecule comprising the steps of: a) selecting a first conformation of the molecule characterized by a first set of coordinates associated with each atom in the molecule by the presence of a pattern of forces among such atoms and by a series of intrinsic forces associated with each atom; b) varying the pattern of forces among such atoms in a non-random manner and randomly varying the series of intrinsic forces associated with each atom so as to generate a second conformation of the molecule characterized by a second set of coordinates associated with each atom in the molecule, by a second pattern of forces among each atom and by a second series of intrinsic forces associated with each atom; and c) randomly varying the second set of coordinates so as to obtain a third set of coordinates and thereby generating such possible conformations of the molecule.
    • 本发明涉及一种用于产生分子的可能构象的方法,包括以下步骤:a)选择分子的第一构象,所述第一构象的特征在于通过存在力图形的分子中与每个原子相关联的第一组坐标 在这些原子之间以及与每个原子相关联的一系列内在力; b)以非随机方式改变这些原子之间的力的模式并且随机地改变与每个原子相关联的一系列内在力,以便产生分子的第二构象,其特征在于与每个原子相关联的第二组坐标 分子,通过每个原子之间的第二个力图案和与每个原子相关联的第二系列内在力; 以及c)随机地改变所述第二组坐标以获得第三组坐标,从而产生所述分子的这种可能的构象。