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    • 46. 发明授权
    • Processes and reagents for sulfurization of oligonucleotides
    • 寡核苷酸硫化的方法和试剂
    • US08058448B2
    • 2011-11-15
    • US12351605
    • 2009-01-09
    • Muthiah ManoharanMichael E. JungKallanthottathil G. RajeevRajendra K. PandeyGang Wang
    • Muthiah ManoharanMichael E. JungKallanthottathil G. RajeevRajendra K. PandeyGang Wang
    • C07D285/01C07H21/00
    • C07H21/00C07H21/04Y02P20/55
    • The present invention relates to processes and reagents for oligonucleotide synthesis and purification. One aspect of the present invention relates to compounds useful for activating phosphoramidites in oligonucleotide synthesis. Another aspect of the present invention relates to a method of preparing oligonucleotides via the phosphoramidite method using an activator of the invention. Another aspect of the present invention relates to sulfur-transfer agents. In a preferred embodiment, the sulfur-transfer agent is a 3-amino-1,2,4-dithiazolidine-5-one. Another aspect of the present invention relates to a method of preparing a phosphorothioate by treating a phosphite with a sulfur-transfer reagent of the invention. In a preferred embodiment, the sulfur-transfer agent is a 3-amino-1,2,4-dithiazolidine-5-one. Another aspect of the present invention relates to compounds that scavenge acrylonitrile produced during the deprotection of phosphate groups bearing ethylnitrile protecting groups. In a preferred embodiment, the acrylonitrile scavenger is a polymer-bound thiol. Another aspect of the present invention relates to agents used to oxidize a phosphite to a phosphate. In a preferred embodiment, the oxidizing agent is sodium chlorite, chloramine, or pyridine-N-oxide. Another aspect of the present invention relates to methods of purifying an oligonucleotide by annealing a first single-stranded oligonucleotide and second single-stranded oligonucleotide to form a double-stranded oligonucleotide; and subjecting the double-stranded oligonucleotide to chromatographic purification. In a preferred embodiment, the chromatographic purification is high-performance liquid chromatography.
    • 本发明涉及寡核苷酸合成和纯化的方法和试剂。 本发明的一个方面涉及可用于在寡核苷酸合成中活化亚磷酰胺的化合物。 本发明的另一方面涉及使用本发明的活化剂通过亚磷酰胺方法制备寡核苷酸的方法。 本发明的另一方面涉及硫转移剂。 在优选的实施方案中,硫转移剂是3-氨基-1,2,4-二噻唑烷-5-酮。 本发明的另一方面涉及通过用本发明的硫转移试剂处理亚磷酸酯制备硫代磷酸酯的方法。 在优选的实施方案中,硫转移剂是3-氨基-1,2,4-二噻唑烷-5-酮。 本发明的另一方面涉及清除在带有乙腈基保护基团的磷酸酯基团去保护过程中产生的丙烯腈的化合物。 在优选的实施方案中,丙烯腈清除剂是聚合物结合的硫醇。 本发明的另一方面涉及用于将亚磷酸盐氧化成磷酸盐的试剂。 在优选的实施方案中,氧化剂是亚氯酸钠,氯胺或吡啶-N-氧化物。 本发明的另一方面涉及通过退火第一单链寡核苷酸和第二单链寡核苷酸来纯化寡核苷酸以形成双链寡核苷酸的方法; 并对双链寡核苷酸进行色谱纯化。 在优选的实施方案中,色谱纯化是高效液相色谱法。
    • 49. 发明申请
    • DELIVERY OF RNAI CONSTRUCTS TO OLIGODENDROCYTES
    • 将RNAI结构递送到寡糖脱乙酰壳多糖
    • US20110118340A1
    • 2011-05-19
    • US12866444
    • 2009-02-06
    • Muthiah ManoharanKallanthottathil G. RajeevDinah SahWilliam QuerbesPamela TanQingmin Chen
    • Muthiah ManoharanKallanthottathil G. RajeevDinah SahWilliam QuerbesPamela TanQingmin Chen
    • A61K31/7088A61P31/12A61P25/00A61P25/18A61P25/16A61P25/28
    • C12N15/1131A61K47/551A61K47/554C12N15/111C12N2310/14C12N2310/315C12N2310/321C12N2310/3515C12N2320/11C12N2320/32C12N2310/3521
    • The invention provides methods for delivering a double-stranded nbonucleic acid (dsRNA) to the central nervous system of a subject, and particularly, to oligodendrocytes of a subject by localized delivery to the brain, e.g., to the corpus caïlosum. For example, the dsRNA molecules can include a first sequence that is selected from the Sroup consisting of the sense sequences of Tables 8, 10, 13-16, and a second sequence selected from the group consisting of the antisense sequences of Tables 8, 10, and 13-16. The dsRNA molecules can include naturally occurring nucleotides or can include at least one modified nucleotide, such as a 2′-O-methyl modified nucleotide, a nucleotide comprising a 5′-phosphorothioate group, or a terminal nucleotide linked to a conjugate group, such as to a cholesteryl derivative or a vitamin E group. Alternatively, the modified nucleotide may be chosen from the group consisting of a 2f-deoxy-2′-fliιioro modified nucleotide, a 2′-de-oxy-modified nucleotide, a locked nucleotide, an abasic nucleotide, 2′-amino-modified nucleotide, 2′-alkyl-modified nucleotide, morpholino nucleotide, a phosphoramidate, and a non-natural bas comprising nucleotide. Generally, such modified sequences will be based on a first sequence of a dsRNA selected from the group consisting of the sense sequences of Tables 8, 10, and 13-16, and a second sequence selected from the group consisting of the antisense sequences of Tables 8 10, and 13-16.
    • 本发明提供了将双链核糖核酸(dsRNA)递送到受试者的中枢神经系统,特别是通过局部递送至脑的例如对胼the体的受试者的少突胶质细胞的方法。 例如,dsRNA分子可以包括选自由表8,10,13-16的有义序列组成的组的第一序列和选自表8,10的反义序列的第二序列 ,和13-16。 dsRNA分子可以包括天然存在的核苷酸,或者可以包括至少一个修饰的核苷酸,例如2'-O-甲基修饰的核苷酸,包含5'-硫代磷酸酯基团的核苷酸或与缀合物连接的末端核苷酸, 关于胆固醇衍生物或维生素E组。 或者,修饰的核苷酸可以选自2f-脱氧-2'-氟修饰的核苷酸,2'-脱氧修饰的核苷酸,锁定的核苷酸,无碱基的核苷酸,2'-氨基修饰的 核苷酸,2'-烷基修饰的核苷酸,吗啉代核苷酸,氨基磷酸酯和包含核苷酸的非天然碱基。 通常,这样的修饰序列将基于选自表8,10和13-16的有义序列的dsRNA的第一序列和选自下表的反义序列的第二序列 8 10和13-16。
    • 50. 发明授权
    • Oligonucleotides comprising a ligand tethered to a modified or non-natural nucleobase
    • 包含与修饰或非天然核碱基连接的配体的寡核苷酸
    • US07632932B2
    • 2009-12-15
    • US11197753
    • 2005-08-04
    • Muthiah ManoharanKallanthottathil G. RajeevJie Xia
    • Muthiah ManoharanKallanthottathil G. RajeevJie Xia
    • C07H21/00C07H21/02C07H21/04C12Q1/68
    • C07H21/00A61K31/7115C07F9/6561C07H21/02C12Q1/6883Y02A50/385Y02A50/387Y02A50/393Y02A50/395Y02A50/411Y02A50/463Y02A50/465Y02A50/467
    • One aspect of the present invention relates to a double-stranded oligonucleotide comprising at least one ligand tethered to an altered or non-natural nucleobase. In certain embodiments, the non-natural nucleobase is difluorotolyl, nitropyrrolyl, or nitroimidazolyl. In certain embodiments, the ligand is a steroid or aromatic compound. In certain embodiments, only one of the two oligonucleotide strands comprising the double-stranded oligonucleotide contains a ligand tethered to an altered or non-natural nucleobase. In certain embodiments, both of the oligonucleotide strands comprising the double-stranded oligonucleotide independently contain a ligand tethered to an altered or non-natural nucleobase. In certain embodiments, the oligonucleotide strands comprise at least one modified sugar moiety. Another aspect of the present invention relates to a single-stranded oligonucleotide comprising at least one ligand tethered to an altered or non-natural nucleobase. In certain embodiments, the non-natural nucleobase is difluorotolyl, nitropyrrolyl, or nitroimidazolyl. In certain embodiments, the ligand is a steroid or aromatic compound. In certain embodiments, the ribose sugar moiety that occurs naturally in nucleosides is replaced with a hexose sugar, polycyclic heteroalkyl ring, or cyclohexenyl group. In certain embodiments, at least one phosphate linkage in the oligonucleotide has been replaced with a phosphorothioate linkage.
    • 本发明的一个方面涉及包含至少一个与改变的或非天然核碱基连接的配体的双链寡核苷酸。 在某些实施方案中,非天然核碱基是二氟苯甲酰基,硝基吡咯基或硝基咪唑基。 在某些实施方案中,配体是类固醇或芳族化合物。 在某些实施方案中,包含双链寡核苷酸的两条寡核苷酸链中只有一条含有与改变的或非天然核碱基连接的配体。 在某些实施方案中,包含双链寡核苷酸的两条寡核苷酸链都独立地包含与改变的或非天然核碱基连接的配体。 在某些实施方案中,寡核苷酸链包含至少一个修饰的糖部分。 本发明的另一方面涉及包含至少一个与改变的或非天然核碱基连接的配体的单链寡核苷酸。 在某些实施方案中,非天然核碱基是二氟苯甲酰基,硝基吡咯基或硝基咪唑基。 在某些实施方案中,配体是类固醇或芳族化合物。 在某些实施方案中,在核苷中天然存在的核糖部分被己糖,多环杂烷基环或环己烯基取代。 在某些实施方案中,寡核苷酸中的至少一个磷酸键被硫代磷酸酯键取代。